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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793967.1_cds_XP_016436198.1_3121
CDS Infomation

[gene=LOC107762357] [db_xref=GeneID:107762357] [protein=chitin elicitor receptor kinase 1-like] [protein_id=XP_016436198.1] [location=complement(join(10850..11014,11194..11292,11393..11531,11683..11771,11853..12004,12106..12199,12490..12579,12949..13148,13461..13625,13736..13743,13828..13867,14354..14978))] [gbkey=CDS]
Sequence

ATGATTTTTCAAGAAAATAGAAGCTTTAATTTAGTGTTAGGCATATTAGTGTTGAACATT
CTGTGGGTGGGGGCTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCGTTTTAT
TTATGGAATGGTGCAAACCTTACTTTCATATCTTATTCTTTTTCTACCACCATAAAAAAT
ATTCTTAGTTATAATCCTCAGATAACCAAACCAGATACTATTCAATTCCAAAGCAGAGTT
AATGTTCCCTTCTCATGTGGCTGTATAAATGGGGAATTCATGGGCCATCAGTTTGATTTG
CAGGTCAAGACTAGTACTACTTATCCGAGAATTGACCGATTTTATTTTTCGAACCTTACA
ACAGTTGAAATGTTGCAGAAGTCTAACAGTTATGATCCTAACAATGTTCCTGTAAATTCT
ATAGTAAAGGTTATTGTGAACTGCTCTTGTGGGAATAGTCAGGTGTCAAAAGACTATGGT
CTATTCATAACTTATCCGATTCGCCCTAATGAGACTTTGGCTACAATAGCCAATGATTTT
AAGCTACCACAGAAGTTGTTGGAGGACTATAATCCTGAAGCAAATTTCAGCAGAGGGACT
GGTCTGGTTTTCATTCCTGGAAAAGATCAAAATGGAACTTATCCACCATTAAGGACTTCA
ACAAGCTCAACAGGAATTTCGGGTGGAGCTATAGCTGGCATATTGGTTGCAGCAGTTTTT
GTTCTAGCCCTTTTAGCGGTTTTCTTGTATCTTTTCTTAATTAAAGGCAGGAAAACGGAG
GACGAATCATTTCTTGACATGGCACCTTACAAACATAGTAGTAATGAGCACGTTCATGGT
CATGCAAATTTAGAGAATTCTTCAGAACAAGGTTCTCTTAATAAGGGTGCTTCTCCAGAG
CCCCCAAGGATCACTGTGGATAAATCAGTGGAATTTTCATATGAAGAACTAGCTAATGCC
AGCGATAACTTCAGCACAGCCTACAAGATTGGTCAAGGTGGTTTTGCATCTGTTTACTAT
GCAGAGTTAAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAAAGAG
TTCCTTGCTGAATTGAAGGTTTTGACCCACGTTCATCACTTGAACTTGGTACGTTTGATA
GGATATTGCATTGAAGGATCTTTGTGCTTAGTCTACGAATACGTTGACAATGGAAACCTA
AGCCAACACTTGCATGGTTTAGGTAGGACACCATTGCCATGGTCTACCAGGGTGCAAATT
GCTCTGGATTCAGCTAGAGGCCTCGAGTATATCCATGAACACACTGTTCCTGTATATATC
CATCGTGACATTAAATCAGCCAACATTTTGATCGATAAAAACTTCCGTGCAAAGGTTGCT
GACTTTGGACTTACAAAACTGATAGAAACTGAAGGTTCTATGCACACTCGTCTTGTTGGT
ACTTTTGGTTACATGGCCCCAGAGTATGGTCAGTTTGGTGATGTTTCTCTCAAAACTGAT
GTATATGCTTTTGGAGTTGTGCTTTATGAATTAATATCTGCTAAACAAGCTATTATCAGA
GCTAGTGAAATTGCTACTGAATCGAAGGGGCTCGTTACAATGTTTGAGGATGTGCTTAAA
GAGATTGATCCTAGAGAAGGAATATGCAAATTGGTAGATCCAAAACTTGGTGATGATTAT
CCCCTGGATTCAGTCTGGAAGGTGGCTCTTCTTGCCAAGTCTTGCACACATGAAAATCCT
CAACTGAGGCCAAGTATGAGGTCAATAGTAGTAGCTTTAATGACAATATCATCCTCAACA
GCAGATTGGAACATTGCTGCATTTTATGAGAACCAGGGCCTTGCCCATCTCATGTCAGGA
AGGTAA

Peptide Sequence

PEP ID

XP_016436198.1
PEP Infomation

PREDICTED: chitin elicitor receptor kinase 1-like [Nicotiana tabacum]
Sequence

MIFQENRSFNLVLGILVLNILWVGAKSQCSDDCDALASFYLWNGANLTFISYSFSTTIKN
ILSYNPQITKPDTIQFQSRVNVPFSCGCINGEFMGHQFDLQVKTSTTYPRIDRFYFSNLT
TVEMLQKSNSYDPNNVPVNSIVKVIVNCSCGNSQVSKDYGLFITYPIRPNETLATIANDF
KLPQKLLEDYNPEANFSRGTGLVFIPGKDQNGTYPPLRTSTSSTGISGGAIAGILVAAVF
VLALLAVFLYLFLIKGRKTEDESFLDMAPYKHSSNEHVHGHANLENSSEQGSLNKGASPE
PPRITVDKSVEFSYEELANASDNFSTAYKIGQGGFASVYYAELRGEKAAIKKMDMQATKE
FLAELKVLTHVHHLNLVRLIGYCIEGSLCLVYEYVDNGNLSQHLHGLGRTPLPWSTRVQI
ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLIETEGSMHTRLVG
TFGYMAPEYGQFGDVSLKTDVYAFGVVLYELISAKQAIIRASEIATESKGLVTMFEDVLK
EIDPREGICKLVDPKLGDDYPLDSVWKVALLAKSCTHENPQLRPSMRSIVVALMTISSST
ADWNIAAFYENQGLAHLMSGR

Transcript Sequence

Gene sequence data has not been registered.